I. Department of laser technology
I.1. Laboratory of information technology
I.2. Laboratory of laser microtechnology
I.3. Laboratory of secondary ion mass-spectrometry
I.4. Laboratory of applied optics
I.5. Laboratory of material and surface analysis
I.6.Laboratory of femtosecond spectroscopy
II. Department of Biophotonics
II.1. Laboratory of laser microscopy and spectroscopy
II.2. Laboratory of cell biophotonics
II.3. Laboratory of imaging and visualization
III. External labs, based on the Cooperation agreement
III.1 Laboratory of applied biophysics FNS UPJŠ in Košice
III.2 Laboratory of biophotonic technologies, Faculty of natural science, UCM Trnava